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ProteoWizard
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#include "FrequencyData.hpp"#include "FrequencyDataTestData.hpp"#include "pwiz/data/misc/CalibrationParameters.hpp"#include "pwiz/utility/misc/unit.hpp"#include "pwiz/utility/misc/Filesystem.hpp"#include "pwiz/utility/misc/Std.hpp"#include <boost/filesystem/operations.hpp>Go to the source code of this file.
Functions | |
| void | diff (const string &filename1, const string &filename2) |
| void | test () |
| void | testFind () |
| void | testAddition () |
| void | testNoiseFloor () |
| void | cleanTests () |
| void | testNoiseFloorVarianceCalculation () |
| int | main (int argc, char *argv[]) |
Variables | |
| ostream * | os_ |
| string | filename1 = "FrequencyDataTest.output1.txt" |
| void diff | ( | const string & | filename1, |
| const string & | filename2 | ||
| ) |
Definition at line 40 of file FrequencyDataTest.cpp.
References filename1, os_, and unit_assert.
Referenced by pwiz::data::diff_string(), CubicHermiteSplineTest::InterpolationTest(), pwiz::data::operator<<(), test(), test(), testBinaryDataArray(), testChromatogram(), testCompound(), testConfiguration(), testContact(), testEvidence(), testIdentData(), testInstrument(), testModification(), testMSData(), testObject(), testObject_ChromatogramList(), testObject_SpectrumList(), testObjectWithMSData(), testPeptide(), testPrediction(), testProtein(), testProteinList(), testProteomeData(), testQR(), testRectangularQR(), testRetentionTime(), testRun(), testSerialize(), testSerializeReally(), testSnapModifications(), testSoftware(), testSpectrum(), testTarget(), testTraData(), testTransition(), testValidation(), testWriteRead(), testWriteRead(), testWriteRead(), testWriteRead(), testWriteRead(), testWriteReadBMS1(), testWriteReadBMS2(), testWriteReadCMS1(), testWriteReadCMS2(), testWriteReadMS1(), testWriteReadMS2(), validateReadIndexed(), validateWriteRead(), and validateWriteRead().
| void test | ( | ) |
Definition at line 53 of file FrequencyDataTest.cpp.
References pwiz::data::CalibrationParameters::A, pwiz::data::FrequencyData::analyze(), pwiz::data::CalibrationParameters::B, pwiz::data::FrequencyData::calibrationParameters(), pwiz::data::FrequencyData::data(), diff(), filename1, pwiz::data::FrequencyData::max(), pwiz::data::FrequencyData::mean(), pwiz::data::FrequencyData::meanSquare(), pwiz::data::FrequencyData::noiseFloor(), pwiz::data::FrequencyData::normalize(), pwiz::data::FrequencyData::observationDuration(), pwiz::data::FrequencyData::observationDurationEstimatedFromData(), os_, pwiz::data::FrequencyData::retentionTime(), pwiz::data::FrequencyData::scale(), pwiz::data::FrequencyData::scanNumber(), pwiz::data::FrequencyData::shift(), pwiz::data::FrequencyData::sumSquares(), pwiz::data::FrequencyData::transform(), unit_assert, unit_assert_equal, pwiz::data::FrequencyData::variance(), and pwiz::data::FrequencyData::write().
Referenced by main().
| void testFind | ( | ) |
Definition at line 151 of file FrequencyDataTest.cpp.
References pwiz::data::FrequencyData::data(), filename1, pwiz::data::FrequencyData::findNearest(), and unit_assert.
Referenced by main().
| void testAddition | ( | ) |
Definition at line 175 of file FrequencyDataTest.cpp.
References pwiz::data::FrequencyData::data(), filename1, pwiz::data::FrequencyData::transform(), and unit_assert.
Referenced by main().
| void testNoiseFloor | ( | ) |
Definition at line 195 of file FrequencyDataTest.cpp.
References filename1, pwiz::data::FrequencyData::noiseFloor(), os_, and pwiz::data::FrequencyData::variance().
Referenced by main().
| void cleanTests | ( | ) |
Definition at line 203 of file FrequencyDataTest.cpp.
References pwiz::util::expand_pathmask(), and os_.
Referenced by main().
| void testNoiseFloorVarianceCalculation | ( | ) |
Definition at line 213 of file FrequencyDataTest.cpp.
References pwiz::data::FrequencyData::analyze(), pwiz::data::FrequencyData::cutoffNoiseFloor(), pwiz::data::FrequencyData::data(), pwiz::data::CalibrationParameters::frequency(), os_, sampleFrequencyData_, sampleMassData_, sampleMassDataSize_, pwiz::data::CalibrationParameters::thermo_FT(), and unit_assert_equal.
Referenced by main().
| int main | ( | int | argc, |
| char * | argv[] | ||
| ) |
Definition at line 247 of file FrequencyDataTest.cpp.
References cleanTests(), os_, test(), TEST_EPILOG, TEST_FAILED, TEST_PROLOG, testAddition(), testFind(), testNoiseFloor(), and testNoiseFloorVarianceCalculation().
| ostream* os_ |
Definition at line 37 of file FrequencyDataTest.cpp.
Referenced by cleanTests(), diff(), main(), test(), testNoiseFloor(), and testNoiseFloorVarianceCalculation().
| string filename1 = "FrequencyDataTest.output1.txt" |
Definition at line 50 of file FrequencyDataTest.cpp.
Referenced by diff(), test(), testAddition(), testFind(), testNoiseFloor(), validateMmgfMzxmlRoundTrip(), validateReadIndexed(), validateWriteRead(), and validateWriteRead().