Here is a list of all class members with links to the classes they belong to:
- a -
- a : CustomPair, mzrtEqual
- A : pwiz::data::CalibrationParameters
- a() : pwiz::proteome::Fragmentation
- a1 : TestFragmentation
- a1Plus2 : TestFragmentation
- A_ : DemuxDebugRWTest, ParametrizedCosine
- a_ : pwiz::frequency::MagnitudeLorentzian, pwiz::math::Parabola
- a_b : pwiz::data::Diff< object_type, config_type, object_result_type >
- abbreviation : pwiz::proteome::AminoAcid::Info::Record
- abscissa_type : pwiz::math::MatchedFilter::KernelTraits< Kernel >, pwiz::math::MatchedFilter::ProductSpace< X, Y >, pwiz::math::MatchedFilter::SampledData< space_type >
- abundance : pwiz::chemistry::detail::Isotope, pwiz::chemistry::MassAbundance, pwiz::proteome::AminoAcid::Info::Record
- accept() : EvenMS2Predicate, EvenPredicate, FTSieve, HasBinaryDataPredicate, pwiz::analysis::ChromatogramList_Filter::Predicate, pwiz::analysis::ChromatogramList_FilterPredicate_IndexSet, pwiz::analysis::ChromatogramList_LockmassRefiner, pwiz::analysis::ChromatogramList_SavitzkyGolaySmoother, pwiz::analysis::ChromatogramList_XICGenerator, pwiz::analysis::ChromatogramListWrapper, pwiz::analysis::ProteinList_Filter::Predicate, pwiz::analysis::ProteinList_FilterPredicate_IdSet, pwiz::analysis::ProteinList_FilterPredicate_IndexSet, pwiz::analysis::SpectrumList_3D, pwiz::analysis::SpectrumList_ChargeStateCalculator, pwiz::analysis::SpectrumList_Filter::Predicate, pwiz::analysis::SpectrumList_FilterPredicate_ActivationType, pwiz::analysis::SpectrumList_FilterPredicate_AnalyzerType, pwiz::analysis::SpectrumList_FilterPredicate_ChargeStateSet, pwiz::analysis::SpectrumList_FilterPredicate_DefaultArrayLengthSet, pwiz::analysis::SpectrumList_FilterPredicate_IdSet, pwiz::analysis::SpectrumList_FilterPredicate_IndexSet, pwiz::analysis::SpectrumList_FilterPredicate_MSLevelSet, pwiz::analysis::SpectrumList_FilterPredicate_MzPresent, pwiz::analysis::SpectrumList_FilterPredicate_Polarity, pwiz::analysis::SpectrumList_FilterPredicate_PrecursorMzSet, pwiz::analysis::SpectrumList_FilterPredicate_ScanEventSet, pwiz::analysis::SpectrumList_FilterPredicate_ScanNumberSet, pwiz::analysis::SpectrumList_FilterPredicate_ScanTimeRange, pwiz::analysis::SpectrumList_FilterPredicate_ThermoScanFilter, pwiz::analysis::SpectrumList_IonMobility, pwiz::analysis::SpectrumList_LockmassRefiner, pwiz::analysis::SpectrumList_MetadataFixer, pwiz::analysis::SpectrumList_PeakFilter, pwiz::analysis::SpectrumList_PeakPicker, pwiz::analysis::SpectrumList_Smoother, pwiz::analysis::SpectrumList_TitleMaker, pwiz::analysis::SpectrumList_ZeroSamplesFilter, pwiz::identdata::Reader, pwiz::msdata::Reader, pwiz::msdata::SpectrumIterator::Sieve, pwiz::proteome::Reader, pwiz::tradata::Reader, SelectedIndexPredicate
- acceptZeroLengthSpectra : pwiz::msdata::Reader::Config
- access() : pwiz::minimxml::SAXParser::Handler::Attributes
- accession : pwiz::identdata::DBSequence, pwiz::identdata::dbsequence_p, pwiz::msdata::MSData
- activation : pwiz::msdata::Precursor
- activityDate : pwiz::identdata::ProteinDetection, pwiz::identdata::SpectrumIdentification
- AdaptedErrorDerivative() : pwiz::frequency::DerivativeTest::AdaptedErrorDerivative< value_type >
- AdaptedErrorFunction() : pwiz::frequency::DerivativeTest::AdaptedErrorFunction< value_type >
- add() : pwiz::minimxml::XMLWriter::Attributes
- additionalSearchParams : pwiz::identdata::SpectrumIdentificationProtocol
- addListener() : pwiz::util::IterationListenerRegistry
- addListenerWithTimer() : pwiz::util::IterationListenerRegistry
- addParamMap() : pwiz::identdata::Pep2MzIdent
- adjustUnknownTimeZonesToHostTimeZone : pwiz::msdata::Reader::Config
- affiliations : pwiz::identdata::Person
- algorithm_ : pwiz::analysis::SpectrumList_PeakPicker, pwiz::analysis::SpectrumList_Smoother
- allDataProcessingPtrs() : pwiz::msdata::MSData
- allNttProb : pwiz::data::pepxml::PeptideProphetResult
- allocator_type : pwiz::util::shared_map< keyT, valueT, _Pr, _Alloc >, pwiz::util::virtual_map< keyT, valueT, _Pr, _Alloc >
- alpha() : pwiz::frequency::MagnitudeLorentzian, pwiz::frequency::TruncatedLorentzianParameters
- AlternativeProtein() : pwiz::data::pepxml::AlternativeProtein
- alternativeProteins : pwiz::data::pepxml::SearchHit
- am_ : ralab::base::resample::Convert2Dense, ralab::base::resample::SamplingWith
- AmbiguousResidue() : pwiz::identdata::AmbiguousResidue
- ambiguousResidue : pwiz::identdata::MassTable
- aminoAcid : pwiz::data::pepxml::AminoAcidModification
- AminoAcidModification() : pwiz::data::pepxml::AminoAcidModification
- aminoAcidModifications : pwiz::data::pepxml::SearchSummary
- aN : TestFragmentation
- analsysis : pwiz::data::pepxml::AnalysisTimestamp
- analysis : pwiz::data::pepxml::AnalysisResult, pwiz::data::pepxml::AnalysisSummary, pwiz::data::pepxml::PeptideProphetResult
- analysisCollection : pwiz::identdata::IdentData
- analysisData : pwiz::identdata::DataCollection
- analysisParams : pwiz::identdata::ProteinDetectionProtocol
- analysisProtocolCollection : pwiz::identdata::IdentData
- AnalysisResult() : pwiz::data::pepxml::AnalysisResult
- analysisResult : pwiz::data::pepxml::SearchHit
- analysisSampleCollection : pwiz::identdata::IdentData
- AnalysisSoftware() : pwiz::identdata::AnalysisSoftware
- analysisSoftwareList : pwiz::identdata::IdentData
- analysisSoftwarePtr : pwiz::identdata::ProteinDetectionProtocol, pwiz::identdata::Provider, pwiz::identdata::SpectrumIdentificationProtocol
- analysisSummary : pwiz::data::pepxml::MSMSPipelineAnalysis
- analyze() : pwiz::analysis::MSDataAnalyzerDriver, pwiz::data::FrequencyData
- analyzer() : pwiz::msdata::ComponentList, pwiz::msdata::LegacyAdapter_Instrument
- analyzer_ : pwiz::analysis::MSDataAnalyzerDriver
- angle() : pwiz::math::MatchedFilter::Correlation< Y >
- aNPlus2 : TestFragmentation
- applyWeighting : pwiz::analysis::MSXDemultiplexer::Params, pwiz::analysis::OverlapDemultiplexer::Params, pwiz::analysis::SpectrumList_Demux::Params
- area : pwiz::analysis::Peak, pwiz::data::peakdata::Peak
- area_ : ralab::base::ms::PeakPicker< TReal, TIntegrator >
- argsFormat() : pwiz::analysis::analyzer_strings< analyzer_type >, pwiz::analysis::analyzer_strings< MetadataReporter >, pwiz::analysis::analyzer_strings< RegionSIC >, pwiz::analysis::analyzer_strings< RegionSlice >, pwiz::analysis::analyzer_strings< RegionTIC >, pwiz::analysis::analyzer_strings< RunSummary >, pwiz::analysis::analyzer_strings< SpectrumBinaryData >, pwiz::analysis::analyzer_strings< SpectrumTable >
- argsUsage() : pwiz::analysis::analyzer_strings< analyzer_type >, pwiz::analysis::analyzer_strings< MetadataReporter >, pwiz::analysis::analyzer_strings< RegionSIC >, pwiz::analysis::analyzer_strings< RegionSlice >, pwiz::analysis::analyzer_strings< RegionTIC >, pwiz::analysis::analyzer_strings< RunSummary >, pwiz::analysis::analyzer_strings< SpectrumBinaryData >, pwiz::analysis::analyzer_strings< SpectrumTable >
- argumentCount() : pwiz::frequency::DerivativeTest::AdaptedErrorDerivative< value_type >, pwiz::frequency::DerivativeTest::AdaptedErrorFunction< value_type >, pwiz::frequency::DerivativeTest::ParametrizedDerivativeSlice< value_type >, pwiz::frequency::DerivativeTest::ParametrizedFunctionSlice< value_type >, pwiz::frequency::DerivativeTest::VectorFunction< value_type >
- arrayExampleCount_ : pwiz::msdata::TextWriter
- assign() : pwiz::util::BinaryData< T >
- assumedCharge : pwiz::data::pepxml::SpectrumQuery
- at() : pwiz::util::BinaryData< T >
- atomicNumber : pwiz::chemistry::detail::Element, pwiz::chemistry::Element::Info::Record
- atomicWeight : pwiz::chemistry::detail::Element, pwiz::chemistry::Element::Info::Record
- Attribute : pwiz::data::peakdata::Peak
- attribute() : pwiz::minimxml::SAXParser::Handler::Attributes::attribute
- Attribute_Decay : pwiz::data::peakdata::Peak
- Attribute_Frequency : pwiz::data::peakdata::Peak
- attribute_list : pwiz::minimxml::SAXParser::Handler::Attributes
- Attribute_Phase : pwiz::data::peakdata::Peak
- Attributes : pwiz::data::peakdata::Peak
- attributes : pwiz::data::peakdata::Peak
- Attributes : pwiz::minimxml::SAXParser::Handler::Attributes::attribute, pwiz::minimxml::SAXParser::Handler::Attributes
- attrs : pwiz::minimxml::SAXParser::Handler::Attributes
- auditCollection : pwiz::identdata::IdentData
- author : pwiz::data::pepxml::PeptideProphetSummary
- authors : pwiz::identdata::BibliographicReference
- autoUnescape : pwiz::minimxml::SAXParser::Handler::Attributes
- autoUnescapeAttributes : pwiz::minimxml::SAXParser::Handler
- autoUnescapeCharacters : pwiz::minimxml::SAXParser::Handler
- averageDeltaMass() : pwiz::proteome::Modification, pwiz::proteome::ModificationList, pwiz::proteome::ModificationMap
- averageMassDelta : pwiz::tradata::Modification
- avgMass : TestAminoAcid, TestFormula, TestModifiedPeptide
- avgMassDelta : pwiz::identdata::Modification, pwiz::identdata::SubstitutionModification
- avgMassNeutral : TestPeptide
- avgMassPlus1 : TestPeptide
- avgMassPlus2 : TestPeptide